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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cla011274 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
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Family |
GeBP |
Protein Properties |
Length: 397aa MW: 44129.9 Da PI: 4.599 |
Description |
GeBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cla011274 | genome | ICuGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF573 | 118.3 | 4.2e-37 | 106 | 204 | 1 | 97 |
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgk.spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97
klfqrlw++eDei lLqG++d+++++g+ + ++ d+ fy+++k++++++++k+qlveK+rrLKkK+++ k++sgk+++f+++hdq +fe+s+kiW
Cla011274 106 KLFQRLWTDEDEIELLQGFLDYTMQRGTtHHHQnDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVIGKISSGKDFNFKSPHDQATFEISRKIWS 204
579*************************633446****************************************************************6 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 397 aa
Download sequence Send
to blast |
MDPRNDAVFP DEDLEDDEES LDDEDDDEEE EELNDDPSPS TSSAGAVPVP SVSATVTVAT 60 PAVSVVPPPS IVSISSADLI RQRLETATAE PLTLQGEKKP LDESRKLFQR LWTDEDEIEL 120 LQGFLDYTMQ RGTTHHHQND TALFYDQIKS KLQLDFNKNQ LVEKLRRLKK KYRNVIGKIS 180 SGKDFNFKSP HDQATFEISR KIWSNTGRIG VDDNALDDDE PAAPTPYASY MDHRNEEMMA 240 NCAEKKPTPT PKSRKRTRPG SGIRMDVPRS SNENLSKEKN STYHNNTNNN ENVNNVAVAG 300 LIEETVRSCL SPLFKELLNT SMGGGLCGGS RGFSGLASHP IPLSFGGASI NFGGGGEMAD 360 ERWRKQQILE LEVYSKRLEL VQEQIKTALE DLRSMGG
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT5G28040.1 | 2e-67 | DNA-binding storekeeper protein-related transcriptional regulator |