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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cla009053 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
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Family |
Trihelix |
Protein Properties |
Length: 444aa MW: 49992.7 Da PI: 5.4227 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cla009053 | genome | ICuGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 83.9 | 2e-26 | 305 | 389 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
rW++ ev+ Li +r+++e+++r++ +k+ Wee+s m++ g++rs+k+Ckekwen+nk++k++ + k + +tcpyf++l+
Cla009053 305 RWPQAEVQSLISLRTSLEHKFRATGSKGSIWEEISVEMQKMGYKRSAKKCKEKWENMNKYFKRTIVTGKAS-IANGKTCPYFQELD 389
8**************************************************************98887775.566679******97 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 444 aa
Download sequence Send
to blast |
MDLFTGDHRI PSSDNFPQHV APFPDPTDLL YAAPSAVFPP ADIITHLSNP PPPPQKLRPI 60 RCNGRSPAGS QAENIFDGAL RSFQCVSSSP EGGFSGDQLC VANIDPCQYF DSSAKDDKPE 120 VKDNGGFGDI IGNDYFSEEE TKNGGSGAAI AAENLSRSRE GPQLDDDSCS TSDGVDGVFS 180 TKKHLSHKRK RTRRSLEHFV ENLVMKVMDK QEEMHRQLID MIEKKEKERT VREEAWKQRE 240 IERMRRDEEL RAQETSRSLA IISLIQNLLG HEIQISRPVE NQCTEEDGGE SSIQKELKSD 300 PSGRRWPQAE VQSLISLRTS LEHKFRATGS KGSIWEEISV EMQKMGYKRS AKKCKEKWEN 360 MNKYFKRTIV TGKASIANGK TCPYFQELDI LYRNGVVNTG AVFDSTNTEN NSKAERSIDP 420 FHEEAFVEGE SEHIKQEALD MVQF
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 347 | 355 | KRSAKKCKE |