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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Cla008676 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
|
| Family |
C2H2 |
| Protein Properties |
Length: 195aa MW: 20878.3 Da PI: 4.3733 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cla008676 | genome | ICuGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 15.1 | 6.6e-05 | 169 | 192 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23
++C+ C++sF + L++H + H
Cla008676 169 FSCKSCDRSFGSDGALQSHSKAkH 192
89*****************88777 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 195 aa
Download sequence Send
to blast |
MCYLISDSDF GSEDEELASL PAENGKPSQK EKPMAGKIFS LKPESSKKED VKSVELSKED 60
GDDSDDDEDS DEDEDSDDES DEEMLGAESD SDDEDDGSES DEETPKKVQS DKKRPNESAS 120
KTPVSKKAKL ASAEKTESKK GGHTATPHPA KKLVKTPGKA ETPKSGGQFS CKSCDRSFGS 180
DGALQSHSKA KHGGK
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Mediates the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events (By similarity). {ECO:0000250}. |
