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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cla007790 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
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Family |
Trihelix |
Protein Properties |
Length: 490aa MW: 56129.6 Da PI: 5.3255 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cla007790 | genome | ICuGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 93.3 | 2.4e-29 | 46 | 130 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
rW+++e++aL+++r++m++++r+++lk+plWeevs+k++e g++r++k+Ckek+en+ k++k++k+g++++ + ++++yf+qlea
Cla007790 46 RWPREETMALLKVRSSMDTAFRDASLKAPLWEEVSRKLAELGYNRNAKKCKEKFENIYKYHKRTKDGRSGK--ANGKNYRYFEQLEA 130
8********************************************************************96..55668*******85 PP
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2 | trihelix | 101.5 | 6.6e-32 | 327 | 412 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
rW+k+e+ aLi++r++++ +++++ k+plWee+s +m++ g+ rs+k+Ckekwen+nk++k++ke++kkr +e+s+tcpyf+ql+a
Cla007790 327 RWPKEEIDALIQLRTNLQMKYQDNGPKGPLWEEISLAMKKLGYDRSAKRCKEKWENINKYFKRVKESNKKR-PEDSKTCPYFQQLDA 412
8*********************************************************************8.99***********85 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0010192 | Biological Process | mucilage biosynthetic process |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 490 aa
Download sequence Send
to blast |
MLEISPSPEN STAVAAAVVN RAAEEDGAAA SAGFSEDADR NWPGNRWPRE ETMALLKVRS 60 SMDTAFRDAS LKAPLWEEVS RKLAELGYNR NAKKCKEKFE NIYKYHKRTK DGRSGKANGK 120 NYRYFEQLEA LDNNPLLPSQ ADSMEEIPRI IPNNVVHNAI PCSVVNPSAN FVETTTTSIS 180 TSTTSCSSKE SGGTRKKKRK FVEFFERLMN EVIEKQEKLQ KKFVEALEKC EVERLAREEE 240 WKMQELARIK KERERLNQER SIAAAKDAAV LSFLKVFSEQ VGTVQFPENL ISVENLTEKQ 300 DDGNVDRNTS TQENINNGNS NQISSSRWPK EEIDALIQLR TNLQMKYQDN GPKGPLWEEI 360 SLAMKKLGYD RSAKRCKEKW ENINKYFKRV KESNKKRPED SKTCPYFQQL DALYKQKSKK 420 IVNNPANPNY ELKPEELLMH MMGGQEESHQ PESATDDGEA ENADQNQEDE DEDEDYQIVA 480 NNNRNQMEVN
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that binds specific DNA sequence. {ECO:0000250}. |