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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cla006329 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
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Family |
GRAS |
Protein Properties |
Length: 471aa MW: 52951.9 Da PI: 6.2444 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cla006329 | genome | ICuGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 472.9 | 1.8e-144 | 46 | 468 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
l++lLl+cA++v+ g+l a+ +L ++s+las dgd+mqR+aayf+eALa r+++++++lyka+++++ + +se++ + klf+e++P+lk++++++Nq
Cla006329 46 LIHLLLTCANHVAVGSLDSANLALDQISHLASADGDTMQRIAAYFAEALADRILKTWPGLYKAFNSTKIP--MVSEKILVKKLFFEMFPFLKVAFVLTNQ 143
689*************************************************************999998..69************************** PP
GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgE 200
aI+ea+ege+++HiiD+++++ +QW+aLlq L+ Rpegpp+lRiTgv++ +ke l ++++rL++ Ae+l++pf+fn v +rl+dl++e+Lrvk+gE
Cla006329 144 AIVEAMEGEKMIHIIDLNANETAQWLALLQVLSVRPEGPPHLRITGVHP----QKEVLDQMARRLTDEAEKLDIPFQFNS-VISRLDDLDMEKLRVKTGE 238
*************************************************....9**************************.79***************** PP
GRAS 201 alaVnlvlqlhrll........................................................desvsleserdevLklvkslsPkvvvvveq 244
ala+n+vlqlh+ll + s++ ++d++L+ ++sl Pkv+vv+eq
Cla006329 239 ALAINSVLQLHTLLgcdnevlqkpspsaaksangvqysryphlnqttlsdlldkdlvngcspspdsvsssALSQANVTKIDSFLNGLWSLTPKVMVVTEQ 338
******************************************************************996633333333799******************* PP
GRAS 245 eadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkv 344
+++hn+++++er+leal++y+a+fd+le++++r+s er k+E++l+g+ei+n++acegaer+erhe+ ekW++r++ aGF+ v+ls++ ++qa++ll+ +
Cla006329 339 DSNHNGSTLMERLLEALHTYAAIFDCLESNMSRTSLERLKLEKMLFGEEIKNIIACEGAERKERHEKQEKWSQRFDVAGFRHVSLSYYGMMQARSLLQGY 438
**************************************************************************************************** PP
GRAS 345 ksdgyrveeesgslvlgWkdrpLvsvSaWr 374
+ dgyr++ee+g+++++W+drpL+svSaWr
Cla006329 439 GCDGYRMKEENGCVMICWQDRPLFSVSAWR 468
*****************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 471 aa
Download sequence Send
to blast |
MFQDEGTSSI TSSPLQFFTM MSLSPKLGSP YPWLRELKSE ERGLYLIHLL LTCANHVAVG 60 SLDSANLALD QISHLASADG DTMQRIAAYF AEALADRILK TWPGLYKAFN STKIPMVSEK 120 ILVKKLFFEM FPFLKVAFVL TNQAIVEAME GEKMIHIIDL NANETAQWLA LLQVLSVRPE 180 GPPHLRITGV HPQKEVLDQM ARRLTDEAEK LDIPFQFNSV ISRLDDLDME KLRVKTGEAL 240 AINSVLQLHT LLGCDNEVLQ KPSPSAAKSA NGVQYSRYPH LNQTTLSDLL DKDLVNGCSP 300 SPDSVSSSAL SQANVTKIDS FLNGLWSLTP KVMVVTEQDS NHNGSTLMER LLEALHTYAA 360 IFDCLESNMS RTSLERLKLE KMLFGEEIKN IIACEGAERK ERHEKQEKWS QRFDVAGFRH 420 VSLSYYGMMQ ARSLLQGYGC DGYRMKEENG CVMICWQDRP LFSVSAWRCC K
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |