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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cla003347 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
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Family |
NAC |
Protein Properties |
Length: 327aa MW: 37306.2 Da PI: 6.7432 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cla003347 | genome | ICuGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 159.7 | 1.2e-49 | 24 | 157 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel... 99
pGfrFhPtdeelv +yLkkk+e++++++ + i+++diyk++PwdLpk + ++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+++++
Cla003347 24 PGFRFHPTDEELVGFYLKKKIENHPVSM-QLIRQLDIYKYDPWDLPKLAWTGEKEWYFYCQRDRKYRNSARPNRVTGAGFWKATGTDRPIYSTNSSNfks 122
9************************999.89***************8777899***************************************94433455 PP
NAM 100 ......vglkktLvfykgrapkgektdWvmheyrl 128
+glkk+Lvfy+gra+k+ ktdW+mhe+rl
Cla003347 123 ksktiiIGLKKSLVFYTGRASKALKTDWMMHEFRL 157
556677***************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 327 aa
Download sequence Send
to blast |
MEERNELVGS VEEDDDVMLP LPLPGFRFHP TDEELVGFYL KKKIENHPVS MQLIRQLDIY 60 KYDPWDLPKL AWTGEKEWYF YCQRDRKYRN SARPNRVTGA GFWKATGTDR PIYSTNSSNF 120 KSKSKTIIIG LKKSLVFYTG RASKALKTDW MMHEFRLPDS PPNDSWAICR IFKKTNTSAA 180 QRGASSSLPK QYEKLENKEY STTINVPLST YDPFDYLEGK LPELSIPNEP FIIAPPPMEM 240 SDIAKSAMDV SSILFNISSS LLGEFGSTPA THISDPFTSS FHYHDHGHAH PDTFSSPTTL 300 LQQNALPLEH SHPCNSPLSS IWDKFLN
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 1e-52 | 8 | 182 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-52 | 8 | 182 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-52 | 8 | 182 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-52 | 8 | 182 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-52 | 8 | 182 | 7 | 174 | NAC domain-containing protein 19 |
3swm_B | 2e-52 | 8 | 182 | 7 | 174 | NAC domain-containing protein 19 |
3swm_C | 2e-52 | 8 | 182 | 7 | 174 | NAC domain-containing protein 19 |
3swm_D | 2e-52 | 8 | 182 | 7 | 174 | NAC domain-containing protein 19 |
3swp_A | 2e-52 | 8 | 182 | 7 | 174 | NAC domain-containing protein 19 |
3swp_B | 2e-52 | 8 | 182 | 7 | 174 | NAC domain-containing protein 19 |
3swp_C | 2e-52 | 8 | 182 | 7 | 174 | NAC domain-containing protein 19 |
3swp_D | 2e-52 | 8 | 182 | 7 | 174 | NAC domain-containing protein 19 |
4dul_A | 1e-52 | 8 | 182 | 4 | 171 | NAC domain-containing protein 19 |
4dul_B | 1e-52 | 8 | 182 | 4 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Promotes periclinal root capforming cell divisions. Activates expression of its negative regulator SMB in a feedback loop for controlled switches in cell division plane. {ECO:0000269|PubMed:19081078}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Repressed by SMB in oriented-divised root cap stem cells. {ECO:0000269|PubMed:19081078}. |