PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla002395
Organism
Citrullus lanatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family EIL
Protein Properties Length: 461aa    MW: 53038.4 Da    PI: 4.5984
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla002395genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3388.68.8e-119303511353
                XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekve 100
                ++lkkrmwkd+++lk++ke++ +    +e+     +s  ++e++rrkkm+raQD+iLkYM k+me+c+aqGfvYgi+pekgkpv+g+s+sLr+WW+++v+
  Cla002395  30 DDLKKRMWKDRQRLKKMKEKRDD----EEP-----ESAAREEASRRKKMARAQDSILKYMDKIMEACKAQGFVYGIVPEKGKPVTGSSESLREWWRNDVR 120
                79*************88888886....566.....556789*********************************************************** PP

                XXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----GGG CS
       EIN3 101 fdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkphd 200
                f++++p+ai+k  + ++i  +es+l  +++s  h l +lqDTtlgS+Lsalmqhc ppqr+fplekg++pPWWPtG+elwwge+g +  +g ppykkphd
  Cla002395 121 FEQDAPMAIAKFLP-KVI--EESGL--DPNSFLHLLTDLQDTTLGSILSALMQHCIPPQRKFPLEKGLAPPWWPTGNELWWGEQGPAGGHGVPPYKKPHD 215
                ***********944.455..45666..79*********************************************************************** PP

                --HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXX CS
       EIN3 201 lkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrkqspkvtlsceqkedvegkkeskikhvqavkt 300
                lkkawk+svL+avikhmsp+++++r+l+rqsk lq km+ake+ ++++v+nqee++         +l+  ++k+++  + +e+ e+k+++k      ++ 
  Cla002395 216 LKKAWKISVLAAVIKHMSPDMDNMRKLVRQSKNLQAKMTAKETLTWAKVVNQEEALS--------QLT--RKKLKITPDVEEEEEEKEHEK------NRG 299
                ******************************************************855........333..444555544444334333333......222 PP

                XXXXX.XXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS
       EIN3 301 tagfp.vvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353
                ++g++ + +krk    e+++v ++ + + cq++ +++se+ ++f dkn+++++e
  Cla002395 300 EQGTDgIMEKRK-CIFEEEAVADS-ILYPCQNQWCPQSEVLMGFMDKNARTEHE 351
                334440455555.55666666555.89************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.2E-11030269No hitNo description
Gene3DG3DSA:1.10.3180.104.7E-65146275IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.18E-57148271IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 461 aa     Download sequence    Send to blast
MMVEFHGEIR DPNDGEDQEH EEEEEEISYD DLKKRMWKDR QRLKKMKEKR DDEEPESAAR  60
EEASRRKKMA RAQDSILKYM DKIMEACKAQ GFVYGIVPEK GKPVTGSSES LREWWRNDVR  120
FEQDAPMAIA KFLPKVIEES GLDPNSFLHL LTDLQDTTLG SILSALMQHC IPPQRKFPLE  180
KGLAPPWWPT GNELWWGEQG PAGGHGVPPY KKPHDLKKAW KISVLAAVIK HMSPDMDNMR  240
KLVRQSKNLQ AKMTAKETLT WAKVVNQEEA LSQLTRKKLK ITPDVEEEEE EKEHEKNRGE  300
QGTDGIMEKR KCIFEEEAVA DSILYPCQNQ WCPQSEVLMG FMDKNARTEH ETQCIYRGGQ  360
TAEQEQFSEE QSIDTHLKSV VDWMNWELSR AEPGSDEARI EDAGDGSGSS TVEDYWNGGA  420
VEEAFEMQRR SMDLNASPAE DLGAQQDATS IWDLRYEWAE E
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A1e-541492734128Protein ETHYLENE INSENSITIVE 3
4zds_B1e-541492734128Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004146925.20.0PREDICTED: putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9LX161e-136EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A4D6L8B21e-166A0A4D6L8B2_VIGUN; Ethylene-insensitive protein 3
STRINGXP_008453800.10.0(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-115EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]