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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cla000383 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
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Family | bZIP | ||||||||
Protein Properties | Length: 253aa MW: 28096.4 Da PI: 4.7618 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 48 | 2.6e-15 | 198 | 250 | 4 | 55 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkke 55 +++rr++kNRe+A rsR+RK+a++ eLe v +Le+eN +L ++e lk++ Cla000383 198 QQKQRRMIKNRESAARSRERKQAYTLELESLVTQLEQENARLlREEYWPLKEM 250 689************************************99625566666665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 7.3E-11 | 195 | 253 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.6E-13 | 197 | 249 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.795 | 197 | 242 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 3.04E-20 | 199 | 241 | No hit | No description |
SuperFamily | SSF57959 | 5.94E-11 | 199 | 244 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.4E-14 | 200 | 242 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 202 | 217 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence Send to blast |
MASSNVEMAS TSKTNPDLPR QSSVCSISTI IADLHHTDPS RNLASMSMDD LLKNIYSDAQ 60 THNQVQDENP IIGSSISPQD TFPLPKELST RTVEEVWKEI VAGGDQQRRE SATDQEITLE 120 DFLSKAGAVC DDDVRVPVIS EPGGFAVDST LNNQLQIPSQ QLEGPMVGGY ASGIDGRIVG 180 VGRGKRRAVE EPVDKATQQK QRRMIKNRES AARSRERKQA YTLELESLVT QLEQENARLL 240 REEYWPLKEM SLK |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | LN681842 | 1e-133 | LN681842.1 Cucumis melo genomic scaffold, anchoredscaffold00022. | |||
GenBank | LN713259 | 1e-133 | LN713259.1 Cucumis melo genomic chromosome, chr_5. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022989686.1 | 1e-147 | G-box-binding factor 4-like isoform X3 | ||||
TrEMBL | A0A0A0KEF1 | 1e-120 | A0A0A0KEF1_CUCSA; Uncharacterized protein | ||||
STRING | XP_004158618.1 | 1e-120 | (Cucumis sativus) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2028 | 34 | 81 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44080.1 | 4e-30 | bZIP family protein |