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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Ciclev10033719m |
| Common Name | CICLE_v10033719mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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| Family |
NAC |
| Protein Properties |
Length: 371aa MW: 42466.4 Da PI: 4.7574 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Ciclev10033719m | genome | ICGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 82.5 | 8.7e-26 | 8 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratk..sgyWkat 86
lp Gf+F+P+deel+ yLkkkv+g ++l+e i+++++y+ +P+++ + + ++++yfF++ +kk+++g+r r++ g+W+
Ciclev10033719m 8 LPHGFQFRPSDEELIELYLKKKVSGIFIPLAEYfIRDCNLYEEKPSEIWNshggpY-LNADEDLYFFTQLKKKSSKGSRIDRKVGsfGGTWQGE 100
699************************9998888**************74345533.3468899******************877678****** PP
NAM 87 gkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
k+++s ++ ++g kk + + k + + W+mhey+l
Ciclev10033719m 101 DAGKDIVSGqSKIKIGSKKRFRYEK--KGCEDHGAWIMHEYTL 141
******99745667********984..4444589*******98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 371 aa
Download sequence Send
to blast |
MQEHRPFLPH GFQFRPSDEE LIELYLKKKV SGIFIPLAEY FIRDCNLYEE KPSEIWNSHG 60
GPYLNADEDL YFFTQLKKKS SKGSRIDRKV GSFGGTWQGE DAGKDIVSGQ SKIKIGSKKR 120
FRYEKKGCED HGAWIMHEYT LHLPKNQATN YVLCRLRKNQ PTGHGIMKYG SAKKRKLKDF 180
QDNSNQSEQV ADIEMDRLLT HQQNQQQNYM DYQEVSCSSS DMMSEQSLAG GMGLASSVTE 240
QHSVIDDHMQ QQQSRQISVP NLEFYYGPSM EMMMSHFDQM ICNQQSDSGN NMLQGRETGE 300
NYHCYSESIV EVPMAVPESL VQHEDSDGLP ELIEEDYSFL EDLLHDDAEE PIGDVRCSFG 360
LMLDLDDLLS *
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 3e-14 | 1 | 160 | 6 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 3e-14 | 1 | 160 | 6 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 3e-14 | 1 | 160 | 6 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 3e-14 | 1 | 160 | 6 | 166 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 3e-14 | 1 | 160 | 9 | 169 | NAC domain-containing protein 19 |
| 3swm_B | 3e-14 | 1 | 160 | 9 | 169 | NAC domain-containing protein 19 |
| 3swm_C | 3e-14 | 1 | 160 | 9 | 169 | NAC domain-containing protein 19 |
| 3swm_D | 3e-14 | 1 | 160 | 9 | 169 | NAC domain-containing protein 19 |
| 3swp_A | 3e-14 | 1 | 160 | 9 | 169 | NAC domain-containing protein 19 |
| 3swp_B | 3e-14 | 1 | 160 | 9 | 169 | NAC domain-containing protein 19 |
| 3swp_C | 3e-14 | 1 | 160 | 9 | 169 | NAC domain-containing protein 19 |
| 3swp_D | 3e-14 | 1 | 160 | 9 | 169 | NAC domain-containing protein 19 |
| 4dul_A | 3e-14 | 1 | 160 | 6 | 166 | NAC domain-containing protein 19 |
| 4dul_B | 3e-14 | 1 | 160 | 6 | 166 | NAC domain-containing protein 19 |
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