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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Ciclev10033354m |
| Common Name | CICLE_v10033354mg |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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| Family |
LBD |
| Protein Properties |
Length: 228aa MW: 25169 Da PI: 4.796 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Ciclev10033354m | genome | ICGC | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 126 | 1.9e-39 | 7 | 107 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93
+C aCk+lrr+C++dC++apyf+ +q +++fa+vhk+FGasnv+kll +lp ++r+da+ ++ yeA ar++dP+yG+v++i++lqqq+++l++e
Ciclev10033354m 7 SCGACKFLRRRCTNDCIFAPYFCYDQaAAHFAAVHKVFGASNVSKLLLHLPVHNRSDAAITISYEALARMHDPIYGCVAHIFALQQQVANLQEE 100
6************************978****************************************************************** PP
DUF260 94 lallkee 100
+++l+++
Ciclev10033354m 101 IEMLENH 107
*998876 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 228 aa
Download sequence Send
to blast |
MTGLGSSCGA CKFLRRRCTN DCIFAPYFCY DQAAAHFAAV HKVFGASNVS KLLLHLPVHN 60
RSDAAITISY EALARMHDPI YGCVAHIFAL QQQVANLQEE IEMLENHMAN NLVGAVFSGG 120
SQTPNEPCSQ SYFSPQLEAM NTLYYPNQQA ELLQNHAANI NINQAFESQT NAEIHCLQGW 180
EDQNFLTESN PNHLLGNLDA VEQENFANYP SFDINGNAIN LQGPSWQ*
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