 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Ciclev10032862m |
Common Name | CICLE_v10032862mg |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
Family |
LBD |
Protein Properties |
Length: 184aa MW: 20418.5 Da PI: 7.9117 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Ciclev10032862m | genome | ICGC | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 129.3 | 1.7e-40 | 23 | 122 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94
+CaaCk+l+rkC + C++apyf +++pkkfa vhk+FGasnv+k+l+++pee+red+++sl+yeAear+rdPvyG++g i lq+++ +l+++l
Ciclev10032862m 23 SCAACKLLKRKCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMIELQQDL 116
6********************************************************************************************* PP
DUF260 95 allkee 100
a+++++
Ciclev10032862m 117 AVARAR 122
*99875 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 184 aa
Download sequence Send
to blast |
MEDMKKWMCY KAMRGHEPRS SSSCAACKLL KRKCIPTCIF APYFRSDEPK KFAKVHKVFG 60 ASNVSKILTE VPEEQREDTV NSLAYEAEAR LRDPVYGCIG AIALLQRKMI ELQQDLAVAR 120 ARLARYTTPA ASSCAVLNDL CVGGSPAFSD LAACGDFFDS FSQNSLELNR VGDMYDFSQV 180 PYM*
|