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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Ciclev10032776m |
Common Name | CICLE_v10032776mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
NAC |
Protein Properties |
Length: 203aa MW: 23267.6 Da PI: 9.4141 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Ciclev10032776m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 92.5 | 6.9e-29 | 44 | 173 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94
+p+G+rF P+d+++++ yL k+ g+k++ ik++d+ +++P+d + + +e+yf++ +k +g ++ +tk+gyW+a g d +v+s
Ciclev10032776m 44 VPVGIRFFPRDHQVIQPYLLSKILGTKHTPLYPIKDMDLSTFDPNDVVFDERCRANETYFYAWLVNKRGKGMVQRVVTKRGYWEADGVDVPVYS 137
599***********************9888788**************865556789*************9999999****************** PP
NAM 95 k..kgelvglkktLvfykgrapkgektdWvmheyrl 128
+ vg kk +fy g++p+g+k+ W m eyr+
Ciclev10032776m 138 DreMKVMVGFKKNWTFYLGTEPEGQKSAWSMTEYRV 173
84444559**************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 203 aa
Download sequence Send
to blast |
MSSSLPPASS SSNKILELEE QRSSALKSFN SKNRGRIDFE DGYVPVGIRF FPRDHQVIQP 60 YLLSKILGTK HTPLYPIKDM DLSTFDPNDV VFDERCRANE TYFYAWLVNK RGKGMVQRVV 120 TKRGYWEADG VDVPVYSDRE MKVMVGFKKN WTFYLGTEPE GQKSAWSMTE YRVNPRLIPA 180 DQMNDDVKTR IVSYAVCKIT KA*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 2e-16 | 44 | 201 | 17 | 164 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-16 | 44 | 201 | 17 | 164 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-16 | 44 | 201 | 17 | 164 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-16 | 44 | 201 | 17 | 164 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-16 | 44 | 201 | 20 | 167 | NAC domain-containing protein 19 |
3swm_B | 2e-16 | 44 | 201 | 20 | 167 | NAC domain-containing protein 19 |
3swm_C | 2e-16 | 44 | 201 | 20 | 167 | NAC domain-containing protein 19 |
3swm_D | 2e-16 | 44 | 201 | 20 | 167 | NAC domain-containing protein 19 |
3swp_A | 2e-16 | 44 | 201 | 20 | 167 | NAC domain-containing protein 19 |
3swp_B | 2e-16 | 44 | 201 | 20 | 167 | NAC domain-containing protein 19 |
3swp_C | 2e-16 | 44 | 201 | 20 | 167 | NAC domain-containing protein 19 |
3swp_D | 2e-16 | 44 | 201 | 20 | 167 | NAC domain-containing protein 19 |
4dul_A | 2e-16 | 44 | 201 | 17 | 164 | NAC domain-containing protein 19 |
4dul_B | 2e-16 | 44 | 201 | 17 | 164 | NAC domain-containing protein 19 |
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