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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Ciclev10032332m |
Common Name | CICLE_v10032332mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
Nin-like |
Protein Properties |
Length: 283aa MW: 30929.7 Da PI: 9.4502 |
Description |
Nin-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Ciclev10032332m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | RWP-RK | 76.2 | 3.7e-24 | 26 | 73 | 2 | 49 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRki 49
+k++s++d+skyFslp+ dAA++Lgvc++vLK+iCR +G++RWP+Rk
Ciclev10032332m 26 TKSLSFDDISKYFSLPLSDAANHLGVCVSVLKKICRDNGLDRWPYRKF 73
799********************************************6 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 283 aa
Download sequence Send
to blast |
MMSSLSLHNN SSISKAAASS SISTSTKSLS FDDISKYFSL PLSDAANHLG VCVSVLKKIC 60 RDNGLDRWPY RKFLSGKSIE DIKKYAAREK SKELAELSKI ARKSGFQPLN NETSKLHGVA 120 SPPNLQQQGS KSSPVGQPHV LLNANLTKGI MALDEFKHGF PSDGLSTASY KWWGSRSSDG 180 NDGIHKDESE IDEEDKQAEA KADKESATQA TGNEKSGNGE TESNVDPQGS GLLTAVRKRT 240 VEEGQEALKL GVYKKYCVKQ LDRKERVLLH RIFKSSLPKE WP*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KX064679 | 0.0 | KX064679.1 Citrus trifoliata clone 2 RWP-RK domain containing protein mRNA, complete cds. |