 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Ciclev10030455m |
| Common Name | CICLE_v10030455mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
| Family |
WRKY |
| Protein Properties |
Length: 395aa MW: 44052.2 Da PI: 6.9043 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Ciclev10030455m | genome | ICGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 96.2 | 2.2e-30 | 229 | 287 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+
Ciclev10030455m 229 NDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 287
8***************************99****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 395 aa
Download sequence Send
to blast |
MDQTDQESEM EIDLSLKIDA QEDKKPENGD QNQKVHEDRL DKKYSRDKEG EAEELSLQDE 60
NKNKGELSVL QKEMNRMKKE NTLLRKVVEQ TMKDYYELQV KLTAIQQSSQ QMDISHAFLS 120
LKGNEKAFQE PKGAAQILET KNESPPSASS RDDFSKRIST ELGLSLRLQI EREEDKKDNK 180
EVISASFPLL QKKVEQSDQF SGHPSHVALP PNRKARVSVR TRCQAATIND GCQWRKYGQK 240
IAKGNPCPRA YYRCTVAPGC PVRKQVQRCL EDMSILITTY EGTHNHPLPV GATAMASTAS 300
SAASFMLLDS SYNPLSNAGN NPGFFKASDL HYENAQMNSF AYPPSSRHVN PNDPSKGIVL 360
DLAASSYDLH HQQQLLFPVA ASSSSHSSSQ PGFS*
|
