 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Ciclev10030293m |
| Common Name | CICLE_v10030293mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
| Family |
WOX |
| Protein Properties |
Length: 209aa MW: 24089.7 Da PI: 9.5598 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Ciclev10030293m | genome | ICGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 65.6 | 6.6e-21 | 7 | 66 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
+R+++t+eql +Lee++++ r+p+a+++++++++l +++ ++V++WFqN++a+e++
Ciclev10030293m 7 TRWCPTPEQLMILEEMYRSgVRTPNASQIQHITAHLshfgKIEGKNVFYWFQNHKARERQ 66
8*****************99**************************************97 PP
|
| 2 | Wus_type_Homeobox | 121.6 | 3.2e-39 | 6 | 67 | 3 | 64 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
+tRW+PtpeQ++iLee+y+sG+rtPn+++iq+ita+L+++Gkie+kNVfyWFQN+kaRerqk
Ciclev10030293m 6 STRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARERQK 67
79***********************************************************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 209 aa
Download sequence Send
to blast |
MSPAGSTRWC PTPEQLMILE EMYRSGVRTP NASQIQHITA HLSHFGKIEG KNVFYWFQNH 60
KARERQKLRR KLGKQLQLQQ QQQIFQHHHH LQQCCQVPNH HQQLLHCSFQ SPPAGGSFSN 120
PDKVLTQGML TEDASTKTMS YTWKKGIQER VEMEKSLMGM YGRDWMMMVD VAPRSLQPCC 180
SKPPLRTLEL FPITATNLKE ECNSSKQN*
|
| Expression --
Description ? help
Back to Top |
| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: First expressed in the L1 cells of the lateral regions of a flower primordium at early stage 1, in which the lateral sepals are expected to develop at a later stage. It then rapidly decreases at the late stage 1 and disappears at stage 2. At stage 3, it reappears in all four-sepal young primordia. Not detected at the central zone of the inflorescence meristem and the floral meristem. In stages 4 through 6, when four sepals develop to enclose the flower bud, it is localized at the lateral edges of the four sepals and forms an arch of the L1 cells at the margin of sepals. Expressed in the young primordia of petals and stamens. As the petals and stamens develop, it is limited at the margins of petals and stamens in a way similar to that of sepals. In the vegetative phase, it is expressed at the lateral regions of young leaf primordia, as well as in flowers and floral organs. {ECO:0000269|PubMed:11751640, ECO:0000269|PubMed:14711878}. |
| Uniprot | TISSUE SPECIFICITY: Expressed in aerial parts of seedlings, inflorescences and flowers at low level. Expressed in a restricted number of L1 cells at the lateral regions of flower primordia. {ECO:0000269|PubMed:11751640}. |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor required to initiate organ founder cells in a lateral domain of shoot meristems. Involved in the lateral sepal axis-dependent development of flowers, probably by regulating the proliferation of L1 cells at the lateral region of flower primordia. Required for the formation of the margin cells of the first and second whorl organs. {ECO:0000269|PubMed:11751640, ECO:0000269|PubMed:15169755}. |
| Publications
? help Back to Top |
- Chandler JW,Werr W
Arabidopsis floral phytomer development: auxin response relative to biphasic modes of organ initiation.
J. Exp. Bot., 2014. 65(12): p. 3097-110
[PMID:24744428] - Niu L, et al.
LOOSE FLOWER, a WUSCHEL-like Homeobox gene, is required for lateral fusion of floral organs in Medicago truncatula.
Plant J., 2015. 81(3): p. 480-92
[PMID:25492397] - Alvarez JP,Furumizu C,Efroni I,Eshed Y,Bowman JL
Active suppression of a leaf meristem orchestrates determinate leaf growth.
Elife, 2017.
[PMID:27710768] - Guan C, et al.
Spatial Auxin Signaling Controls Leaf Flattening in Arabidopsis.
Curr. Biol., 2017. 27(19): p. 2940-2950.e4
[PMID:28943086]
|
