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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Ciclev10029283m |
Common Name | CICLE_v10029283mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
LBD |
Protein Properties |
Length: 210aa MW: 22633.8 Da PI: 7.6581 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Ciclev10029283m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 136.6 | 9.2e-43 | 45 | 144 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94
+CaaCk+lrr+Ca++Cvlapyfp ++p+kf ++h++FGasn++k+l++lpe++r da+ss+vyeA ar+rdPvyG++g i +lq+q+++l+a+l
Ciclev10029283m 45 PCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICQLQKQVSELQAQL 138
7********************************************************************************************* PP
DUF260 95 allkee 100
a++++e
Ciclev10029283m 139 AKAQAE 144
*99976 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 210 aa
Download sequence Send
to blast |
MLKMENYEAA ATRNPSKVTS SRAGSSSPPP ISANSSAPPP VIMSPCAACK ILRRRCADKC 60 VLAPYFPPTE PAKFTIAHRV FGASNIIKFL QELPESQRAD AVSSMVYEAS ARIRDPVYGC 120 AGAICQLQKQ VSELQAQLAK AQAEVVSMQC QQANLVALLY KEMGKSPQPN SPQSVDHFIT 180 SPESPEANPC SFFEDNNLSG SLWEPALWT*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in young shoots, stems, leaves and flowers. {ECO:0000269|PubMed:12068116}. |