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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Ciclev10029205m |
| Common Name | CICLE_v10029205mg |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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| Family |
MYB |
| Protein Properties |
Length: 233aa MW: 26371.2 Da PI: 8.7532 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Ciclev10029205m | genome | ICGC | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 31.6 | 3.9e-10 | 17 | 60 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
+WT eEd+l+ +a ++ + +W++Iar ++ g++ +++ r+
Ciclev10029205m 17 SWTREEDKLFERALVTFPEEtpgRWERIARQVP-GKSSVDVQRRY 60
7*****************99*************.**********9 PP
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| 2 | Myb_DNA-binding | 43 | 1.1e-13 | 116 | 160 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+WT+eE+ l++ + +++G+g+W++I+r Rt+ q+ s+ qky
Ciclev10029205m 116 PWTAEEHRLFLIGLEKYGKGDWRSISRNAVVSRTPTQVASHAQKY 160
8*******************************************9 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 233 aa
Download sequence Send
to blast |
MIHNKIDYSY SASTSSSWTR EEDKLFERAL VTFPEETPGR WERIARQVPG KSSVDVQRRY 60
DDLVLDLRKI EAGLVELPGY EDEMDSPGRV AESGASLGNN SNRSRDRETE RRKGVPWTAE 120
EHRLFLIGLE KYGKGDWRSI SRNAVVSRTP TQVASHAQKY FLRMNSVRKD KKRSSIHDIT 180
TVDAAGSSSQ SYDPSWVGPL TDQLETHRLG SPSDFNDQGR SIGGYHSFRF PM*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Detected in the apical inflorescence meristem, in bract primordia arising in its periphery and in floral meristems produced in the axils of bracts (stages 0-3). From stage 3 to stage 8, detected in all floral organs irrespective of their dorsoventral positions. From stage 9, barely detectable in bracts, sepals, and stamens. In the corolla, however, expression was maintained and enhanced in some regions. Within ventral and lateral petals at stage 9, asymmetric pattern of expression with high levels of transcripts in the inner epidermis of the furrow and very reduced levels in the remaining cell layers. In the dorsal petals, from stage 9 onward, detected but with a more even distribution across cell layers than in the ventral petal. {ECO:0000269|PubMed:11937495}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Involved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}. |
