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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Ciclev10029032m |
| Common Name | CICLE_v10029032mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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| Family |
NAC |
| Protein Properties |
Length: 275aa MW: 31314.9 Da PI: 6.7904 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Ciclev10029032m | genome | ICGC | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 148.7 | 2.8e-46 | 4 | 135 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90
lppG+rF Pt+eelv++yL +k+eg++ el++vi+ +++y++ePw+Lpk k+++++++w+fF++r++++++g r++r+t+sgyWkatg+
Ciclev10029032m 4 LPPGYRFFPTEEELVSFYLINKLEGNRQELHRVIPVIRLYEIEPWHLPKlcgeKCQGDTEQWFFFTPRQEREERGGRPSRTTASGYWKATGSPG 97
79****************************99****************767777777888********************************** PP
NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
v+s++++++g+kkt+vfykg+ap+g+kt+W mheyr+
Ciclev10029032m 98 YVYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRA 135
************************************96 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 275 aa
Download sequence Send
to blast |
MEELPPGYRF FPTEEELVSF YLINKLEGNR QELHRVIPVI RLYEIEPWHL PKLCGEKCQG 60
DTEQWFFFTP RQEREERGGR PSRTTASGYW KATGSPGYVY SSDNRVIGVK KTMVFYKGKA 120
PTGRKTKWKM HEYRAIEGAS NPSSAVIPKL RHEFSLCRIY VKSESFRAFD RRPLEAARRE 180
EQPHGGGATT SAPNNIMVRG NGSNTSFQDA IMCDGDVATT SAQNNIMGPR SSSPETSYSG 240
EDHSDYPETN LDNNWNIVAD PQPPLWDWEQ LNWP*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 3e-38 | 4 | 165 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 3e-38 | 4 | 165 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 3e-38 | 4 | 165 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 3e-38 | 4 | 165 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 3e-38 | 4 | 165 | 20 | 171 | NAC domain-containing protein 19 |
| 3swm_B | 3e-38 | 4 | 165 | 20 | 171 | NAC domain-containing protein 19 |
| 3swm_C | 3e-38 | 4 | 165 | 20 | 171 | NAC domain-containing protein 19 |
| 3swm_D | 3e-38 | 4 | 165 | 20 | 171 | NAC domain-containing protein 19 |
| 3swp_A | 3e-38 | 4 | 165 | 20 | 171 | NAC domain-containing protein 19 |
| 3swp_B | 3e-38 | 4 | 165 | 20 | 171 | NAC domain-containing protein 19 |
| 3swp_C | 3e-38 | 4 | 165 | 20 | 171 | NAC domain-containing protein 19 |
| 3swp_D | 3e-38 | 4 | 165 | 20 | 171 | NAC domain-containing protein 19 |
| 4dul_A | 3e-38 | 4 | 165 | 17 | 168 | NAC domain-containing protein 19 |
| 4dul_B | 3e-38 | 4 | 165 | 17 | 168 | NAC domain-containing protein 19 |
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