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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Ciclev10027888m |
Common Name | CICLE_v10027888mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
FAR1 |
Protein Properties |
Length: 737aa MW: 84391 Da PI: 6.9477 |
Description |
FAR1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Ciclev10027888m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FAR1 | 101.8 | 6.9e-32 | 79 | 170 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91
fYn+YA++vGFs+r+s+s++s+r+g i++r+fvC keg+r+ ++k+ +++ +r+r+ tr+gCka+l vk++++gkw+v+ +++eHnHel+p
Ciclev10027888m 79 FYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRtkDREIKRPRTITRVGCKASLSVKMQDSGKWVVSGFVKEHNHELVP 170
9***************************************998888545677889***********************************86 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 737 aa
Download sequence Send
to blast |
MDSEVLEFDI GLGGGSSGRD GDEDAMDISH HVDEEDMVDS PLPVTWGGSG EIYLPEGDLL 60 DLEPYEGMEF ESEEAAKAFY NSYARRVGFS TRVSSSRRSR RDGAIIQRQF VCAKEGFRNL 120 NEKRTKDREI KRPRTITRVG CKASLSVKMQ DSGKWVVSGF VKEHNHELVP PDQVHCLRSH 180 RQISGPAKTL IDTLQAAGMG PRRIMSALIK EYGGISKVGF TEVDCRNYMR NNRQRSLEGE 240 FQLLLDYLKQ MQAENPNFFY AVQGDEDQST GNVFWADPKA RINYTYFGDT VTFDTTYRSN 300 RYRLPFAPFT GVNHHGQPVL FGCAFLINES EASFVWLFKT WLMAMSGRPP VSITTDHDAV 360 IRSAINQVFP ETRHRFCKWH IFKKCQEKLS HVFLQHPHFE AEFHKCVNLT ESIEEFESCW 420 LSLVDKYELR DHEWLQTIYA ARRQWVPVYL RDTFFAEMSI TQRSDSMNSY FDGYVNASTN 480 LNQFFKLYEK ALESRNEKEV KADYDTMNTS PVLKTPSPME RQASELYTRK LFMRFQEELV 540 GTLTFMASKA DDDGEIITYQ VSKYGEDHKA YCVKFNVLEM KASCSCQMFE FSGLPCRHVL 600 TVFRVTNVLT LPSHYMLKRW TRNAKSSVML EERSNDAYTN YLESHTVRYN TLRHEAFKFV 660 DQGAKSLDCY NVAVDALQEA AKKVAVAAKN DGKTTMGNGR IRGNSASDAN RANSVSGNHH 720 ASSNQHLSEE KIRREV*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in hypocotyls, rosette and cauline leaves, inflorescences stems, flowers and siliques. {ECO:0000269|PubMed:15591448}. |
Functional Description ? help
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Source |
Description |
UniProt | Putative transcription activator involved in regulating light control of development. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Up-regulated in hypocotyls by far-red light treatment. {ECO:0000269|PubMed:15591448}. |