 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Ciclev10027171m |
Common Name | CICLE_v10027171mg |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
Family |
ERF |
Protein Properties |
Length: 329aa MW: 35914.3 Da PI: 10.0898 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Ciclev10027171m | genome | ICGC | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63.9 | 3.3e-20 | 167 | 216 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr ++ +grW AeIrd r r++lg+f+taeeAa+a++aa+++l+g
Ciclev10027171m 167 NYRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAEEAARAYDAAARRLRG 216
59*******.**********32....25*************************98 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 329 aa
Download sequence Send
to blast |
MSVSSSLLNN NMQKSTFHTT TVPFFSMPDT FQTPETFRFF TETQSLCGPI FNSNLSFPSL 60 PALNYLNPPH YFPYLTDVSV DSSLFDSETK TESPVFLSEN KKKAVTETET DAATPPVLDG 120 IAAVVGLNVL FGTKTNPTKK TETPDAVEEN IGSPRKNDNN TIPVQKNYRG VRKRPWGRWS 180 AEIRDRIGRC RHWLGTFDTA EEAARAYDAA ARRLRGSKAR TNFEIPSVLP PIATSCSSPS 240 SSGEVKKAKG KVINSNSSGR RNKCSVVTSM AHLFSNNAIS FNNNGFDHHQ AKRNAKAKDT 300 NTLELDLKLG VGLAAKRNTA ASAPSMAV*
|