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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Ciclev10026199m |
Common Name | CICLE_v10026199mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
WOX |
Protein Properties |
Length: 294aa MW: 32434.7 Da PI: 5.875 |
Description |
WOX family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Ciclev10026199m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 65.5 | 7.2e-21 | 105 | 165 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
r+R+t+t+ ql++Le+ F + + +ps+++++e++ +l +++e++V++WFqNrRa+ k+
Ciclev10026199m 105 RQRWTPTPVQLQILESIFDQgTGTPSKQKIKEITVELsqhgQISETNVYNWFQNRRARSKR 165
89*****************99**************************************97 PP
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2 | Wus_type_Homeobox | 103.8 | 1.1e-33 | 104 | 167 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
ar+RWtPtp Q++iLe+++++G+ tP+k++i++it eL+++G+i+++NV++WFQNr+aR+++kq
Ciclev10026199m 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQ 167
689***********************************************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 294 aa
Download sequence Send
to blast |
MEWDNIREAA QQETQTQNQN QNQRGGENDN NNVVNGVMYV KVMTDEQLET LRKQIAVYAT 60 ICEQLVEMHK SLSAHQDLAA AGGRLGNIYC DPLMTSGGGH KISARQRWTP TPVQLQILES 120 IFDQGTGTPS KQKIKEITVE LSQHGQISET NVYNWFQNRR ARSKRKQLVS SSANTLHNGG 180 GAGAGGADSE VETEVDSLLL HDEHKTTKPE NLSSAHSTSQ PQHLRNLPPT PRPRDDDDDP 240 MCFHTPADIS SSQLHFLGVF SNNPRDDHLT GKMGGMPGSY NLYDHAEDYS MAG*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 158 | 166 | RRARSKRKQ |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor which may be involved in developmental processes. {ECO:0000250}. |