 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Ciclev10026107m |
| Common Name | CICLE_v10026107mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
| Family |
MYB |
| Protein Properties |
Length: 318aa MW: 34170.2 Da PI: 8.9518 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Ciclev10026107m | genome | ICGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 63.3 | 4.6e-20 | 12 | 57 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+g+W++eEde l ++v+++G+++W++I++ ++ gR++k+c++rw +
Ciclev10026107m 12 KGPWSPEEDEALQQLVQKHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 57
79******************************.***********985 PP
|
| 2 | Myb_DNA-binding | 56.9 | 4.7e-18 | 66 | 108 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
++T+eEde +++a++++G++ W+tIar ++ gRt++ +k++w++
Ciclev10026107m 66 AFTPEEDEMIIRAHARFGNK-WATIARLLN-GRTDNAIKNHWNST 108
79******************.*********.***********986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0009737 | Biological Process | response to abscisic acid |
| GO:0009751 | Biological Process | response to salicylic acid |
| GO:0009753 | Biological Process | response to jasmonic acid |
| GO:0010200 | Biological Process | response to chitin |
| GO:0046686 | Biological Process | response to cadmium ion |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 318 aa
Download sequence Send
to blast |
MAFNRREVDR IKGPWSPEED EALQQLVQKH GPRNWSLISK SIPGRSGKSC RLRWCNQLSP 60
QVEHRAFTPE EDEMIIRAHA RFGNKWATIA RLLNGRTDNA IKNHWNSTLK RKCSSMLTEN 120
GIFLNCNGYD ADFGNSIQQQ PLKLKRSVSA GSSVPVTTGL YMSPGSPSGS DVSDSSVPGL 180
SSNYNIYKPV ARSGGINVDV NVVPEPETTS SSNDPPTSLS LSLPGVDSSS EVSNKVSEST 240
QAVNAKASVP APVSSDSGSK GLVGFSKEFM AVMQEMIKQE VRTYMAALEQ QRGGACYNGS 300
GGGGDGVLRN VAMQRTG*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | EF537874 | 0.0 | EF537874.1 Citrus sinensis subclone 9 putative R2R3-Myb transcription factor (Myb8) mRNA, complete cds. |
