 |
Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Ciclev10025925m |
| Common Name | CICLE_v10025925mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
| Family |
WRKY |
| Protein Properties |
Length: 364aa MW: 40160 Da PI: 9.5893 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Ciclev10025925m | genome | ICGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 99 | 2.9e-31 | 292 | 349 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D ++WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp+++++tYegeHnh+
Ciclev10025925m 292 DDFSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPSMLVVTYEGEHNHS 349
99************************988****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 364 aa
Download sequence Send
to blast |
MAVELMMEYG NTSHFTDKVE DCAVQEAASG LESVEKLINL LSQQQQVQQN NSHQSSPSSR 60
SSMDLENDCK AVADVAVSKF KRVISLLGRN RIGHARFRRA PVAAPCVDYQ QNQEKDKNLQ 120
QRQQQEVEVV PETKVYYARP IQQIPPLPPP PRNYHQHEFS TLVVPKNGVD LERKDSATTI 180
NFSNYTSAGN SFLSSLTVTG DNDNKQQPSS SSASATFHFT NLSQQVSSAG KPPLSSSSLK 240
RKCSSASDNL ASAKSCGVSS GRCHCTKKRK SRVKRVVRVP AVSLRLSDIP PDDFSWRKYG 300
QKPIKGSPHP RGYYKCSSVR GCPARKHVER ALDDPSMLVV TYEGEHNHSL SVADTRNLIL 360
ESS*
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: In young, mature and senescent leaves. {ECO:0000269|PubMed:11722756}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
