 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Ciclev10024451m |
Common Name | CICLE_v10024451mg |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
Family |
ERF |
Protein Properties |
Length: 126aa MW: 14324.9 Da PI: 5.3658 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Ciclev10024451m | genome | ICGC | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.3 | 1.9e-18 | 19 | 70 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+++AeIrd + g r +lg+f taeeAa+a+++a+ +++g
Ciclev10024451m 19 RYRGVRRRP-WGKFAAEIRDSTRHG-APRLWLGTFTTAEEAARAYDRAAFAMRG 70
6********.**********43333.5*************************99 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 126 aa
Download sequence Send
to blast |
MEKVGRRSKE KEEEATSVRY RGVRRRPWGK FAAEIRDSTR HGAPRLWLGT FTTAEEAARA 60 YDRAAFAMRG PTAVLNFPNE HFLSGKVERG GGTNEGEKEV FEIEYLDDQL LEDLLNFDDD 120 KTKND*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Best hit in Arabidopsis thaliana ? help
Back to Top |
Hit ID |
E-value |
Description |
AT1G04370.1 | 4e-22 | Ethylene-responsive element binding factor 14 |