 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Ciclev10024302m |
| Common Name | CICLE_v10024302mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
| Family |
FAR1 |
| Protein Properties |
Length: 183aa MW: 20921.5 Da PI: 6.8676 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Ciclev10024302m | genome | ICGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 39.3 | 2.1e-12 | 47 | 115 | 20 | 90 |
FAR1 20 kkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
k+ +++ i+++++vC keg+++++k + +r++ r gC akl+v k++ +k++v+ +++eHnH+l+
Ciclev10024302m 47 AKEGESNDIIRKEYVCLKEGQARQSKVV--NCKRRHGIIRGGCSAKLVVVKSEFDKYMVHIFVEEHNHALS 115
44456777*************9998766..88999999*******************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 183 aa
Download sequence Send
to blast |
MNAQNVAGQS NCEDSLYIPE VALDRKPYKG QEFDTLDDAY EFYNKYAKEG ESNDIIRKEY 60
VCLKEGQARQ SKVVNCKRRH GIIRGGCSAK LVVVKSEFDK YMVHIFVEEH NHALSSPRRK 120
SLSQQLAAVN IPTCQQISLF ELQAEGLQNM GSVHRDFYNN DRNLRNELKG HDADMLYEHF 180
SV*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AY336943 | 2e-58 | AY336943.1 Poncirus trifoliata NBS-LRR-type disease resistance protein-like gene, complete sequence. |
