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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Ciclev10022025m |
Common Name | CICLE_v10022025mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
ERF |
Protein Properties |
Length: 234aa MW: 25618.4 Da PI: 7.094 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Ciclev10022025m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63.8 | 3.6e-20 | 134 | 184 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+++AeIrdp++ng +r++lg+++t+e+Aa a+++a+ k++g
Ciclev10022025m 134 QYRGVRRRP-WGKFAAEIRDPKKNG--ARVWLGTYDTPEGAAFAYDRAAFKMRG 184
59*******.***********9998..*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 234 aa
Download sequence Send
to blast |
MNRENMSESD LALLESIRQQ LLEDDFEIFT TFPSETLPIN NNETLNSPVS SFNSFSFTEN 60 INEYLSQGVS SSSHSSLHDG VNGGWISFDD QLGRNNDIGS AIANIDTSMT SPPHPPPLPT 120 PQMDVARGTH VRMQYRGVRR RPWGKFAAEI RDPKKNGARV WLGTYDTPEG AAFAYDRAAF 180 KMRGSKAKLN FPHLIGSNVE PPVRVTKKRG SPEPPSSSSS LSSSSSVVSF RPG*
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT2G44840.1 | 8e-43 | ethylene-responsive element binding factor 13 |