 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Ciclev10021285m |
Common Name | CICLE_v10021285mg |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
Family |
ERF |
Protein Properties |
Length: 310aa MW: 34245.2 Da PI: 6.3687 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Ciclev10021285m | genome | ICGC | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 62.9 | 7e-20 | 154 | 204 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+++AeIrdp+ +g r++lg+f+ta eAa+a+++a+ +l+g
Ciclev10021285m 154 HYRGVRRRP-WGKYAAEIRDPTRRG--VRVWLGTFDTAIEAARAYDRAAFQLRG 204
8********.**********97665..*************************98 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0000302 | Biological Process | response to reactive oxygen species |
GO:0001944 | Biological Process | vasculature development |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009644 | Biological Process | response to high light intensity |
GO:0010200 | Biological Process | response to chitin |
GO:0051301 | Biological Process | cell division |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 310 aa
Download sequence Send
to blast |
MATPIEKSAL EFIEQHLFGE NSPIAGFSSS LSSDTCSQSQ TSSSASSDRS FFNDAVFFDY 60 ESKPQIIDLV TPQPTNTCSE LTNDFFEFDI RPQIQSQPSN CSSEFEPKPK ISPNSSSQSS 120 RKPSLKISVP KKAEGHHFTN RKSKAKPESS EEKHYRGVRR RPWGKYAAEI RDPTRRGVRV 180 WLGTFDTAIE AARAYDRAAF QLRGSKAILN FPLEAGKCDS NAAVARECDS SAEAGACETK 240 RKRDCESEEE ERKAKVVKTE SADTVNEFPL TPASCAAFWD LHLDWDCGVK GIFNAPLLSP 300 LSPQPLMVL*
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | HQ698835 | 0.0 | HQ698835.1 Citrus medica var. sarcodactylis ethylene-responsive element binding factor 6 mRNA, complete cds. |