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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Ciclev10021174m |
Common Name | CICLE_v10021174mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
WRKY |
Protein Properties |
Length: 323aa MW: 35562.8 Da PI: 8.6026 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Ciclev10021174m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 109 | 2.3e-34 | 169 | 226 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK vk+s+fprsYYrCtsa+C+vkk+vers +dp++v++tYeg+Hnh+
Ciclev10021174m 169 EDGYRWRKYGQKAVKDSPFPRSYYRCTSASCNVKKRVERSYTDPSIVVTTYEGQHNHP 226
8********************************************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009624 | Biological Process | response to nematode |
GO:0009733 | Biological Process | response to auxin |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 323 aa
Download sequence Send
to blast |
MERKEVTKTK NHNNMGSSPF ADHLSTGSQL RGVFDLYEGE KGSLGFMELL GVQDFGSSSP 60 PSSSLFDMVQ FQAQNQVPSK GASASSTVNV TKIECSELLN QPATPNSSSI SSASSEALND 120 EQVKVEEHVH DEQNQQKTKK QLKPKKTNQK RQREPRFAFM TKSEVDHLED GYRWRKYGQK 180 AVKDSPFPRS YYRCTSASCN VKKRVERSYT DPSIVVTTYE GQHNHPSPLL PRPTLGGVPH 240 AGNGVVGSSF GMPMPAAFSQ QQLPSLVNSL LPMNFGSSFI NGPTTASFLH ERRFCTPAAG 300 TDLLKDHGLL QDIVPSHMLR EE*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |