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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Ciclev10021132m |
Common Name | CICLE_v10021132mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
ERF |
Protein Properties |
Length: 328aa MW: 36108.6 Da PI: 4.8286 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Ciclev10021132m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63.9 | 3.4e-20 | 198 | 248 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr ++ +g+++AeIrdp++ng +r++lg+++t+e+Aa a+++a+ +++g
Ciclev10021132m 198 HYRGVRTRP-WGKYAAEIRDPKKNG--ARVWLGTYDTPEGAALAYDKAAFEMRG 248
6*****999.***********9998..*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 328 aa
Download sequence Send
to blast |
MYSESISQTD MALLESIRHH LLDDDFEDIN SMMQPLQVED VNSSILQQHQ HQQQQQQQQM 60 PLENFSESDF DLLQNLLEDV NTASSFESDY LNNAPSVYSP TSSFGSAVFD FPLQVTGNVV 120 INNNNNYPIP SYGCYDHPKA LNDAVDSVGW ISFDHHQADQ DDQAISEAAA AAATLDMVTY 180 HQTAGLAARD RDQAKVVHYR GVRTRPWGKY AAEIRDPKKN GARVWLGTYD TPEGAALAYD 240 KAAFEMRGSK AKLNFPHLLG RVNFKPVRVN TTNTTKRGSP ESEPELSPTS SSSSSSSSTS 300 SSSSLLMLPE DSPKPKRRNN NGTSAVA*
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT2G44840.1 | 3e-39 | ethylene-responsive element binding factor 13 |