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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Ciclev10020867m |
| Common Name | CICLE_v10020867mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
| Family |
WRKY |
| Protein Properties |
Length: 353aa MW: 39467.7 Da PI: 10.2381 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Ciclev10020867m | genome | ICGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 99 | 3e-31 | 286 | 343 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ e+p+++++tYegeHnh+
Ciclev10020867m 286 DDYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEEPTMLIVTYEGEHNHP 343
99***********************9988****************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0005516 | Molecular Function | calmodulin binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 353 aa
Download sequence Send
to blast |
MEEVEEANKA AVESCHRVLS LLSQPQDQVQ YKNLMVETGE AVFRFKKVVS LLNNGSGHAR 60
VRKLRKLPNP VNQSIFLENP HHKTEIPSKN LQFLQSSFHD NPVQEMGSLA KSSLTLGNPS 120
LELISNGKQH LQLGQQTPST SAHYHFLQQQ QLQQRLLHQQ QQQQQHHMKL QAEKMFRKSN 180
SGVSLNFDSS SCTPTMSSNR SFISSLSMDG SVANLDGSAF HLIGAPRSSD QSSQQHKRKC 240
SGRGEDGSVK CGSSGRCHCS KKRKHRVKKS IKVPAISNKL ADIPPDDYSW RKYGQKPIKG 300
SPHPRGYYKC SSMRGCPARK HVERCLEEPT MLIVTYEGEH NHPRLPSQSA TT*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By salicylic acid. {ECO:0000269|PubMed:11449049}. |
