PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ciclev10017778m
Common NameCICLE_v10017778mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family BES1
Protein Properties Length: 224aa    MW: 23506 Da    PI: 9.8291
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ciclev10017778mgenomeICGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822111.81.1e-34883480
           DUF822  4 grkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeae 80
                     g  +++ E+E++k+RER+RRai++ki+ GLR+ G+y+l  raD+neVl+ L++eAGwvve+DGttyr+    + + +
  Ciclev10017778m  8 GGGRSEGEKEKTKLRERQRRAITTKIFHGLRKWGGYHLSPRADINEVLRQLAQEAGWVVEPDGTTYRARLPMN-QCH 83
                     44567789***********************************************************554333.333 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056874.3E-3211134IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    Send to blast
MKAAATSGGG RSEGEKEKTK LRERQRRAIT TKIFHGLRKW GGYHLSPRAD INEVLRQLAQ  60
EAGWVVEPDG TTYRARLPMN QCHVCGGATP TTGSSVVIGG GGSGGDSSTT ASPRHAWLGG  120
EPIPNASTNS SNFAAGGFST SPYYSTDTPL ALYIYDNGLT RGPHSSTTSS IATTTVTSSA  180
VHGGDPAAVT LAMQHQQQQF YNLLEAKASN QNTPVSSPLR RLS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006448917.11e-164protein BZR1 homolog 2
TrEMBLV4U8991e-163V4U899_9ROSI; Uncharacterized protein
STRINGXP_006448917.11e-164(Citrus clementina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM2294434
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45880.11e-16beta-amylase 7