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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Ciclev10016229m |
Common Name | CICLE_v10016229mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
WRKY |
Protein Properties |
Length: 275aa MW: 31206.3 Da PI: 5.3849 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Ciclev10016229m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 96.8 | 1.5e-30 | 79 | 137 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++ itY+ eHnh+
Ciclev10016229m 79 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSSVDPSMLLITYSCEHNHP 137
69*************************998****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 275 aa
Download sequence Send
to blast |
MDGRFNSNSN PFTGEQEEND TTPENSSESP PSSSTYNDMM KMTSTSSPKK RRAMQKRVIS 60 VPIKEVEGSR LKGESAPPSD SWAWRKYGQK PIKGSPYPRG YYRCSSSKGC PARKQVERSS 120 VDPSMLLITY SCEHNHPWPL PSTSRNHHHH HHHHHNSKAA KPDRDPEPEP EPEPEPEPEP 180 EHEEKFTDLA DHDNALMTTS ADEFTWFGEM ETTTSTILES PIFADRSQSD CDSLSMFFPM 240 REEDESLFAD LGELPECSMV FRRHRNLGPE VQIC*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |