 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Ciclev10015266m |
| Common Name | CICLE_v10015266mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
| Family |
G2-like |
| Protein Properties |
Length: 442aa MW: 48166.3 Da PI: 6.4699 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Ciclev10015266m | genome | ICGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 87.9 | 9.5e-28 | 169 | 223 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k +++WtpeLH+rFv+aveqL G +kA+P++ilelm++++Lt+++++SHLQkYR++
Ciclev10015266m 169 KMKVDWTPELHRRFVQAVEQL-GVDKAVPSRILELMGIDCLTRHNIASHLQKYRSH 223
5689*****************.********************************86 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0007165 | Biological Process | signal transduction |
| GO:0009658 | Biological Process | chloroplast organization |
| GO:0009910 | Biological Process | negative regulation of flower development |
| GO:0010380 | Biological Process | regulation of chlorophyll biosynthetic process |
| GO:0010638 | Biological Process | positive regulation of organelle organization |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:1900056 | Biological Process | negative regulation of leaf senescence |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 442 aa
Download sequence Send
to blast |
MLAVSPLPNT SKDENQGEMA STFAIDTHEF PDFSDTNLLD SIDFDDLFAG INDSDVLPDL 60
EMDPEILAEF SAGGGDQESE MKASASVEKV EENNFKKEEE DKVSSCGSGA ASGSASGSNF 120
SKEEEIVSKR EEPVSASLKT LAKDGDKGRS KSSTQTKNNN NNNNQGKRKM KVDWTPELHR 180
RFVQAVEQLG VDKAVPSRIL ELMGIDCLTR HNIASHLQKY RSHRKHLLAR EAEAASWSHR 240
RQMYGGATVP SGGKRDMNPW IAPTMGFPPM TPPMHPPHFR PLHVWGHPSM DQSLMHMWPK 300
PVAHSPPPLP QTATVPPSWA QPRPPHWHHQ QVPNGLTPGT PCLLQPLATT RFPAPPVPGI 360
PSHHHAMYKV EPPGIGVPTG QSGPHPLIDF HPSIESIDAA IGDVLSKPWQ PLPLGLKPPS 420
LDSVMGELQR QGVPNIPPSC A*
|
| Expression --
Description ? help
Back to Top |
| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in rosette and cauline leaves. Expressed at low levels in cotyledons and shoots. {ECO:0000269|PubMed:12220263}. |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator that functions with GLK2 to promote chloroplast development. Acts as an activator of nuclear photosynthetic genes involved in chlorophyll biosynthesis, light harvesting, and electron transport. Acts in a cell-autonomous manner to coordinate and maintain the photosynthetic apparatus within individual cells. May function in photosynthetic capacity optimization by integrating responses to variable environmental and endogenous cues (PubMed:11828027, PubMed:12220263, PubMed:17533111, PubMed:18643989, PubMed:19376934, PubMed:19383092, PubMed:19726569). Prevents premature senescence (PubMed:23459204). {ECO:0000269|PubMed:11828027, ECO:0000269|PubMed:12220263, ECO:0000269|PubMed:17533111, ECO:0000269|PubMed:18643989, ECO:0000269|PubMed:19376934, ECO:0000269|PubMed:19383092, ECO:0000269|PubMed:19726569, ECO:0000269|PubMed:23459204}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: By light. Repressed by BZR2. {ECO:0000269|PubMed:12220263, ECO:0000269|PubMed:21214652}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AC209002 | 7e-54 | AC209002.1 Populus trichocarpa clone POP040-E22, complete sequence. |
| Publications
? help Back to Top |
- Leister D,Kleine T
Definition of a core module for the nuclear retrograde response to altered organellar gene expression identifies GLK overexpressors as gun mutants.
Physiol Plant, 2016. 157(3): p. 297-309
[PMID:26876646] - Nagatoshi Y, et al.
GOLDEN 2-LIKE transcription factors for chloroplast development affect ozone tolerance through the regulation of stomatal movement.
Proc. Natl. Acad. Sci. U.S.A., 2016. 113(15): p. 4218-23
[PMID:27035938] - Tokumaru M, et al.
Ubiquitin-Proteasome Dependent Regulation of the GOLDEN2-LIKE 1 Transcription Factor in Response to Plastid Signals.
Plant Physiol., 2017. 173(1): p. 524-535
[PMID:27821720] - Ni F, et al.
Turnip Yellow Mosaic Virus P69 Interacts with and Suppresses GLK Transcription Factors to Cause Pale-Green Symptoms in Arabidopsis.
Mol Plant, 2017. 10(5): p. 764-766
[PMID:27964999] - Wang H,Seo JK,Gao S,Cui X,Jin H
Silencing of AtRAP, a target gene of a bacteria-induced small RNA, triggers antibacterial defense responses through activation of LSU2 and down-regulation of GLK1.
New Phytol., 2017. 215(3): p. 1144-1155
[PMID:28656601]
|
