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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Ciclev10013502m |
| Common Name | CICLE_v10013502mg |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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| Family |
LBD |
| Protein Properties |
Length: 256aa MW: 28972 Da PI: 7.5213 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Ciclev10013502m | genome | ICGC | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 117.1 | 1.1e-36 | 10 | 109 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94
aCa+Ck++rrkC+k+C la+yfpa+qpk+f+nvh+l+G+s vlk+l++++++++++ams++++e+++ra+ Pv+G++g+ ++l++ql+ + +el
Ciclev10013502m 10 ACAVCKYQRRKCEKNCKLAKYFPANQPKTFQNVHRLYGVSSVLKILDSVEDDKKDIAMSTVIFESNMRAEYPVHGCFGLTFRLHHQLQASMEEL 103
7********************************************************************************************* PP
DUF260 95 allkee 100
l++++
Ciclev10013502m 104 RLVNAQ 109
*99987 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 256 aa
Download sequence Send
to blast |
MTIKGGTKQA CAVCKYQRRK CEKNCKLAKY FPANQPKTFQ NVHRLYGVSS VLKILDSVED 60
DKKDIAMSTV IFESNMRAEY PVHGCFGLTF RLHHQLQASM EELRLVNAQL AVCQRHYQNH 120
TQAASASTSS ELGMAMNNMD IYNQQGNEFC VETDDDVKPF IKIEQNPNYY TDMFNNMPLG 180
IQSPSSSHGI PIPLQELECI NSIHDDRVMA FDHTIPDHDR NPYLEPKAKE VSDASRISTR 240
VALHPAKCFS LIRVK*
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