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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Ciclev10011660m |
Common Name | CICLE_v10011660mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
WRKY |
Protein Properties |
Length: 469aa MW: 51853.7 Da PI: 8.5902 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Ciclev10011660m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 104.8 | 4.7e-33 | 188 | 244 | 3 | 60 |
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers d+++ ei+Y+geHnh+k
Ciclev10011660m 188 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSF-DGQIAEIVYKGEHNHPK 244
9***************************************.***************85 PP
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2 | WRKY | 106.3 | 1.6e-33 | 387 | 444 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dg++WrKYGqK+vkg+++prsYYrCt ++C+v+k+ver+++dp+++++tYeg+Hnhe
Ciclev10011660m 387 SDGFRWRKYGQKVVKGNPYPRSYYRCTNPKCKVRKHVERASDDPRAFITTYEGKHNHE 444
7********************************************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009957 | Biological Process | epidermal cell fate specification |
GO:0010214 | Biological Process | seed coat development |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 469 aa
Download sequence Send
to blast |
MKIKEAERIV VAKPVPSRPT RSTFGSFSEL LEGPIHASPP NVCSETAVMA IRPKTVRFKP 60 LVNCAPPNQT ELARTAVCNS SDDVSKSDNK PTVIYKPLAR LVSKTTVSLL ENMGNFDISH 120 QHTQQSVEAQ HPSQDKQNFI SQISSNSNQV LPPLKEKDQT IESFKEASQN LEDPKYFPPV 180 AGDRPSYDGY NWRKYGQKQV KGSEYPRSYY KCTHPNCPVK KKVERSFDGQ IAEIVYKGEH 240 NHPKPQPPKR SSSVTQGLGL GSDGTGQDTN NTVWNTHLSE INEGSDGRVV NQNDLGVLAD 300 STCQAKPLPP FIPVSTGANN TDGGTSDNSC GISGEFDEGR KALEGEDEQP RKRRRSEHQS 360 NGAGLSEDSI LEPRIVVQSS TDSEILSDGF RWRKYGQKVV KGNPYPRSYY RCTNPKCKVR 420 KHVERASDDP RAFITTYEGK HNHEMPLRST TPVTSVQDSL APTSTDKL*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 350 | 354 | RKRRR |
2 | 350 | 355 | RKRRRS |