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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Ciclev10011501m |
Common Name | CICLE_v10011501mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
WRKY |
Protein Properties |
Length: 517aa MW: 55896.7 Da PI: 7.2852 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Ciclev10011501m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 95 | 5.4e-30 | 178 | 236 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+aed +++++tYeg+H h+
Ciclev10011501m 178 NDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCAEDMSILITTYEGTHSHP 236
8***************************99****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0006952 | Biological Process | defense response |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 517 aa
Download sequence Send
to blast |
MGEVREENER LKKMLEQIEK DYKSLQLRFF DILQKADPAK KSTNSTQYFS HDDQIMESEL 60 VSLCLGRSSS PGEVKKEERT SNNASKSSRK NGDDEELKAS LNLALDPKIQ PSLELGVSNL 120 SPENSSEETK EEEAGEAWPP SKVLKTMRGN GDDEVSPQSN VKRARVSVRA RCDAPTLNDG 180 CQWRKYGQKI AKGNPCPRAY YRCTVAPGCP VRKQVQRCAE DMSILITTYE GTHSHPLPVS 240 ATAMASTTSA AASMLLSGSS TSQPGLSSTA PTTTAATEPN GLNFNIYDTS RTKPFYSSNS 300 TSALFPTITL DLTNPSSSFS HFNRFSSSFA SNPRFPSTNL NFSCSSESTL LPTLWGNGFQ 360 AYGPYNQTPN GSLLNLGKNS QEQFYQSFMD KNQNQQAATA SASQQALTET LTKAMTSDPN 420 FRSVIAAAIS TMVGGNATNN GDQENFGQNL MQNNTPPNNS ILSQNGKACA SGYFNGLSTL 480 NSQTGSSSLL QSSLPFPIFK SSPTPTNDNN NKGQSS*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |