 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Ciclev10010497m |
| Common Name | CICLE_v10010497mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
| Family |
Nin-like |
| Protein Properties |
Length: 189aa MW: 21226 Da PI: 6.3858 |
| Description |
Nin-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Ciclev10010497m | genome | ICGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | RWP-RK | 71.6 | 1.1e-22 | 141 | 188 | 2 | 49 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRki 49
+ +++l dl yF+lpi++AA+ +++c+Tv+K+iCR+ G++RWPhRk+
Ciclev10010497m 141 TGKLTLRDLMIYFHLPIEEAARRMKLCPTVVKKICRRDGLHRWPHRKV 188
5689*******************************************7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 189 aa
Download sequence Send
to blast |
MADPRAIVPY HDPHDNSYTE DIFNFINNPN PTFADLSLFE EPSSIPHSTN NPQSGGIITD 60
AGDPFDDPLF WDIGNNCNAG SFQAGPSGNQ AEMSDRGTPA IENAANMKAF PRWPVPPEPY 120
LCSCCLVLRE IIHTNVQRER TGKLTLRDLM IYFHLPIEEA ARRMKLCPTV VKKICRRDGL 180
HRWPHRKV*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AB573149 | 0.0 | AB573149.1 Citrus unshiu genomic DNA, polyembryony locus, cultivar: Miyagawa wase. |
