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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Ciclev10008943m |
| Common Name | CICLE_v10008943mg |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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| Family |
GATA |
| Protein Properties |
Length: 320aa MW: 35283.4 Da PI: 9.759 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Ciclev10008943m | genome | ICGC | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 59.6 | 4.1e-19 | 182 | 215 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
Cs C+tt+TplWR+gp+g+k+LCnaCG+++rk +
Ciclev10008943m 182 CSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKAR 215
*******************************987 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 320 aa
Download sequence Send
to blast |
MAPMYLNPAQ DHSDPFRLAE AQKRDHQRLQ VLHSSSHNRP AASVSRPIFL NSSTQDQGMI 60
KLEGSQQHDQ KIDQRIAGGG SSDLQSSMSQ PKTMTNKLAI RRREVGEGST SDNSSYTSSS 120
SGESMSSKMR LANKIINSSS VSTGTHDESV KVAEKLLHEH DNIEVHYFTT NSSNSNNTVR 180
ICSDCNTTTT PLWRSGPRGP KSLCNACGIR QRKARKAMQA AAESGTTTAK DNSSFSKIKL 240
QNNMEKKPRT SHVAQYKKVQ CNTPDPDPPH HEYRSQRKLC FKDFALSLSS NSALKQVFPR 300
DVEEAAILLM ELSCGFSHT*
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