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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Ciclev10008885m |
| Common Name | CICLE_v10008885mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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| Family |
NAC |
| Protein Properties |
Length: 332aa MW: 37052.8 Da PI: 8.7666 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Ciclev10008885m | genome | ICGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 178 | 2.5e-55 | 10 | 137 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94
lppGfrFhP+deel+++yL +k+++ +++ ++i++vd++k+ePwdLp k+k +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke+++
Ciclev10008885m 10 LPPGFRFHPSDEELITYYLVNKISDASFTG-RAIADVDLNKCEPWDLPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFN 102
79*************************999.89***************99999****************************************9 PP
NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128
+ ++elvg+kktLvfy+grap+gekt+Wvmheyr+
Ciclev10008885m 103 SvTSELVGMKKTLVFYRGRAPRGEKTNWVMHEYRI 137
989999***************************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 332 aa
Download sequence Send
to blast |
MEGDKKEETL PPGFRFHPSD EELITYYLVN KISDASFTGR AIADVDLNKC EPWDLPGKAK 60
MGEKEWYFFS LRDRKYPTGV RTNRATNTGY WKTTGKDKEI FNSVTSELVG MKKTLVFYRG 120
RAPRGEKTNW VMHEYRIHSK SAFRTSKDEW VVCRVFQKSA GAKKFPTNQS RAVNPAYNLD 180
IGASVIPPQM IQAENFQFPV GRNYTGNADQ LAEFTRMFRG GASSSVNNNF PIQSQMNYPL 240
AGGFTISGLN LNLGGATTQP VLRPMPPPPP HPQAMHQEEV TCSMMTSSAY AADQSLTGYA 300
AEINQANGAA GGSRYMSLEH CMDLDSYWPP Y*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 2e-56 | 9 | 164 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 2e-56 | 9 | 164 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 2e-56 | 9 | 164 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 2e-56 | 9 | 164 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 2e-56 | 9 | 164 | 19 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 2e-56 | 9 | 164 | 19 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 2e-56 | 9 | 164 | 19 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 2e-56 | 9 | 164 | 19 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 2e-56 | 9 | 164 | 19 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 2e-56 | 9 | 164 | 19 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 2e-56 | 9 | 164 | 19 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 2e-56 | 9 | 164 | 19 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 2e-56 | 9 | 164 | 16 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 2e-56 | 9 | 164 | 16 | 171 | NAC domain-containing protein 19 |
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