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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Ciclev10007882m |
Common Name | CICLE_v10007882mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
WRKY |
Protein Properties |
Length: 564aa MW: 60931.6 Da PI: 7.1767 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Ciclev10007882m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 101.1 | 6.7e-32 | 217 | 274 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers+ d++++ei+Y+g+H+h+k
Ciclev10007882m 217 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITEIIYKGTHDHPK 274
8****************************************.***************85 PP
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2 | WRKY | 106.3 | 1.6e-33 | 378 | 436 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+
Ciclev10007882m 378 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 436
59********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009611 | Biological Process | response to wounding |
GO:0009961 | Biological Process | response to 1-aminocyclopropane-1-carboxylic acid |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 564 aa
Download sequence Send
to blast |
MEDTEVRVGD AADRTRGADV ASASGAGGGG ARYKLMSPAK LPISRSPCIM IPPGLSPSSF 60 LESPVLLSNV KAEPSPTTGS FFKPQAVHAS VGPRTYSTTT VCSNTLNEGE ASCFEFRPHS 120 RSNMVPADLN PQRSEQYVQT QGRCQTQSFA SSPTIKGEMT VSSNELSLLG PIQMATTGTI 180 VPAEVDSDEP KQMGQPSAGI QASHSDHKGG GPSMPSDDGY NWRKYGQKHV KGSEFPRSYY 240 KCTHPNCEVK KLFERSHDGQ ITEIIYKGTH DHPKPQLSRR YSAGNMMSIQ EERPDKVSSL 300 TCRDGSMYGQ MSHAMETNGT PDLSPVANDD SVEPDVDDDD QYSKRRKMDA LVADVTPVVK 360 PIREPRVVVQ TLSEVDILDD GYRWRKYGQK VVRGNPNPRS YYKCTNAGCP VRKHVERASH 420 DPKAVITTYE GKHNHDVPTA RTSSHDAAGP SAGNGPCRII SEEGEAISLD LGVGISSATE 480 NRSNEQPRAL HSELAHSHTH ASSSSYKIIQ ANAVTAYSGV VNGGMNQYGS RGNPTEGRGV 540 DFPPLNHSSY PYPQNIGRIL TGP*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}. |