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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Ciclev10006869m |
| Common Name | CICLE_v10006869mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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| Family |
NAC |
| Protein Properties |
Length: 220aa MW: 25390.7 Da PI: 9.8843 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Ciclev10006869m | genome | ICGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 92.1 | 9.1e-29 | 9 | 147 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94
lppG+rF Ptdee+v +yL +kv+g++++++ vi+++d+y+ e ++ +++e+ +yfF++ +kk+++g + +r t+ g+W+++ +++ +
Ciclev10006869m 9 LPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENALYFFTTLKKKTENGVQVERETNCGTWRSQKNTRIYRH 102
79****************************999***********99985445688899**************************9988776666 PP
NAM 95 k.........kgelvglkktLvfy..kgrapkgektdWvmheyrl 128
+ k++++g ++ +++ +g++ k +Wvmheyrl
Ciclev10006869m 103 RynktgdkiiKKQHIGSRRNFTYVpkEGSRGGVIKGTWVMHEYRL 147
68888888887788**********5445555556*********98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 220 aa
Download sequence Send
to blast |
MERHQLPALP PGYRFAPTDE EIVAHYLYNK VHGRPVSTSA VIDNIDVYRD ENVWIRIFER 60
TGENALYFFT TLKKKTENGV QVERETNCGT WRSQKNTRIY RHRYNKTGDK IIKKQHIGSR 120
RNFTYVPKEG SRGGVIKGTW VMHEYRLDGI SISNARINNI GDYVICRIKK KQPKREELMS 180
GDNDGPVRNS MSGLVQPPPS NNTSECFYFH CYLTTSVNN*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 2e-19 | 8 | 172 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 2e-19 | 8 | 172 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 2e-19 | 8 | 172 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 2e-19 | 8 | 172 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 2e-19 | 8 | 172 | 16 | 166 | NAC domain-containing protein 19 |
| 4dul_B | 2e-19 | 8 | 172 | 16 | 166 | NAC domain-containing protein 19 |
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