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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Ciclev10006460m |
Common Name | CICLE_v10006460mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
ERF |
Protein Properties |
Length: 301aa MW: 33220 Da PI: 5.2795 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Ciclev10006460m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 56.1 | 9.2e-18 | 42 | 90 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ GVr+++ +gr++AeIrdp + + r++lg+f+tae+Aa a+++a+++++g
Ciclev10006460m 42 FLGVRRRP-WGRYAAEIRDPAT---KERHWLGTFDTAEDAALAYDRAARSMRG 90
56******.**********843...4*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 301 aa
Download sequence Send
to blast |
MDFSNLRTNS SSVPSPTKTK RKQQKQQQQQ QQNHMRQDEI RFLGVRRRPW GRYAAEIRDP 60 ATKERHWLGT FDTAEDAALA YDRAARSMRG SKARTNFVYS DMPAGSSVTS IISPDHYQPP 120 QHDDVVSSLF AVTAAAAADT NTNNNNINQL FNFSDQFSAE TIRRSTTYKP ITSVMDAADQ 180 ADDHQTYTNG DFCELPPLPP DASSSSCYYY NYHDPAAAVA GLMGNSDLGF GAWNDQTTGF 240 DYSSSSSFST TTTGVQYFMQ EQQQHHSGQI FGGMPSVSSD AVTDGFDFSS SSSSSSTYFF 300 *
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