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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Ciclev10006208m |
Common Name | CICLE_v10006208mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
LBD |
Protein Properties |
Length: 130aa MW: 14197.1 Da PI: 7.8869 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Ciclev10006208m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 142.4 | 1.4e-44 | 12 | 111 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94
+CaaCk+ rr+Ca+dCv+apyfpa++p+kfa vhk+FGasnv k+l++l+e++r++a+ss+vyeA+ar +dPv+G+vg i++lqqq+e+l+a+l
Ciclev10006208m 12 PCAACKLIRRRCAQDCVFAPYFPADEPQKFASVHKVFGASNVNKMLQELQEHQRSEAVSSMVYEANARFHDPVRGCVGAISSLQQQVESLQAQL 105
7********************************************************************************************* PP
DUF260 95 allkee 100
al+++e
Ciclev10006208m 106 ALAQAE 111
**9986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 130 aa
Download sequence Send
to blast |
MESGTRQGAL SPCAACKLIR RRCAQDCVFA PYFPADEPQK FASVHKVFGA SNVNKMLQEL 60 QEHQRSEAVS SMVYEANARF HDPVRGCVGA ISSLQQQVES LQAQLALAQA EVEQMRMRLI 120 SPSSSSSHN*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in young shoots, roots, stems, leaves and flowers. {ECO:0000269|PubMed:12068116}. |