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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Ciclev10005189m |
Common Name | CICLE_v10005189mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
C2H2 |
Protein Properties |
Length: 376aa MW: 42331.8 Da PI: 6.6096 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Ciclev10005189m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 14.4 | 0.00011 | 298 | 320 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
+ C +Cgk F + + ++H +++
Ciclev10005189m 298 FMCRKCGKAFAVRGDWRTHEKNC 320
89*****************9987 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 376 aa
Download sequence Send
to blast |
MADPYSNFFS GLLKFNNSPN QNYQHYPASQ QRHFAQTNTF AFNQNQSHHP YYFQYQSSPP 60 SPPLREALPL LSLSPRRHEE EAEEEEEEEE EHHQHSCNIA EAAAAMDVDK NKGKLVEESN 120 LFFSSTSSTA TAALHHEDDD ETTAVTVALH IGLPSPSASE MASLLSSSSE ISGHDHNGDH 180 GGDDSSAGYP FNRLNKGQYW IPTPSQILIG PTQFSCPVCC KTFNRYNNMQ MHMWGHGSQY 240 RKGPESLRGT QPTGMLRLPC YCCAPGCRNN IDHPRAKPLK DFRTLQTHYK RKHGIKPFMC 300 RKCGKAFAVR GDWRTHEKNC GKLWYCICGS DFKHKRSLKD HIKAFGNGHA AYGIDGFEEE 360 DEPASEVEQD NESMQ*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in developing carpels (PubMed:17600712). Expressed in the shoot apical meristem and the replum (PubMed:25039392). {ECO:0000269|PubMed:17600712}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator required for normal differentiation of the ovary transmitting tract cells and pollen tube growth. In Arabidopsis, the transmitting tract facilitates the transport of pollen tubes to the ovules for fertilization (PubMed:17600712). May play a role in the regulation of AGL8/FUL, which is required for normal pattern of cell division, expansion and differentiation during morphogenesis of the silique (PubMed:23515580). Plays a role in replum development by the activation of the homeobox protein KNAT1 (PubMed:25039392). {ECO:0000269|PubMed:17600712, ECO:0000269|PubMed:23515580, ECO:0000269|PubMed:25039392}. |