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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Ciclev10005095m |
| Common Name | CICLE_v10005095mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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| Family |
WRKY |
| Protein Properties |
Length: 404aa MW: 44601 Da PI: 4.9428 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Ciclev10005095m | genome | ICGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 94.6 | 7.2e-30 | 209 | 267 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+vers++dp++ ++ Y+g+H+h+
Ciclev10005095m 209 ADLWAWRKYGQKPIKGSPYPRNYYRCSSSkGCAARKQVERSNTDPNIYIVSYTGDHTHP 267
699************************998****************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0007263 | Biological Process | nitric oxide mediated signal transduction |
| GO:0009739 | Biological Process | response to gibberellin |
| GO:0042742 | Biological Process | defense response to bacterium |
| GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 404 aa
Download sequence Send
to blast |
MGEKFPAKAA DNWDLQAVVR CFSSANNTTA NYTPQIDTTT SGTAAAADES SLEDPLAFLA 60
TMKFDEDDDP FSFPNLFENK NIGFQELEDS YKPFYSTPSS VPEGLINHQQ QQQQQQQQLN 120
SSIVSPMSSS SFPPFVIGEQ NNQQTHYVQQ PLQQQDPQIH QQKQQQLPIR LSSAIPLRPA 180
MPSHAHRSRK RKSPIKKMVC QVTEEKLSAD LWAWRKYGQK PIKGSPYPRN YYRCSSSKGC 240
AARKQVERSN TDPNIYIVSY TGDHTHPRPT HRNSLAGSTR NKFSGTQNHP VSTTPPPPPL 300
PPPTSSSSPL SATCQSPSAP TTPAVDEEMS SIENILANAA DHDKDTSKTL MEEEEEDDDD 360
DDDDLFEDLL IPNLAARGID EDFFKGLKQF GSTAASGSGD NHG*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
