 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Ciclev10004441m |
Common Name | CICLE_v10004441mg |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
Family |
CPP |
Protein Properties |
Length: 717aa MW: 78864.8 Da PI: 6.7372 |
Description |
CPP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Ciclev10004441m | genome | ICGC | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCR | 51 | 2.9e-16 | 420 | 458 | 2 | 40 |
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40
++k+CnCkkskClk+YCeCfaag++C e C+C+dC+Nk
Ciclev10004441m 420 SCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKP 458
689**********************************96 PP
|
2 | TCR | 50.9 | 3.1e-16 | 505 | 544 | 1 | 40 |
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40
++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkN+
Ciclev10004441m 505 RHKRGCNCKKSSCLKKYCECYQGGVGCSINCRCEGCKNTF 544
589***********************************85 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 717 aa
Download sequence Send
to blast |
MDTPKKATQM ATPLSKFEDS PVFNYINSLS PIKPVKSLPV TQTFNSLNFS SPPSIFTSPH 60 ISAHKETRFL RRNNCLGLSK PEFSSENGNK ICRNDGVAND ASQLYDNSAE LQENFDPRVS 120 MEEVSVEASN DSKFAIELPQ ALKYDCGSPG CDSNPCNIES NCMTEMASTS VSVVQFVQEA 180 SENGASEADV RLQRTCQMEQ KNEVTGCEWE SLISDAADLL IFNLPNDSED FKGLMQKSLD 240 SGGRYASVTP RYINGEPIME MIDPPISNLH RGMLRRCLDF ELVTRRKNAD GSSNYGSSVI 300 LHSDEKFASE DKQLVPLKPG SDSPRCMVPG IGLHLNALAI TPQENKNIGI ESLSSVRQIN 360 PHHEPLTSAS TERDIVAVEN GVLLAEDASQ TSAYLAEEEY NQNSPKKKRR RMENAGENES 420 CKRCNCKKSK CLKLYCECFA AGVYCIEPCS CQDCFNKPIH EDTVLATRKQ IESRNPLAFA 480 PKVIRSSDPL PEVGEDTSKT PASARHKRGC NCKKSSCLKK YCECYQGGVG CSINCRCEGC 540 KNTFGRKDGS SSTDPEAEPE DEEMEMCEKS GVDKRFQKTE FLSNEEQNPG SALPTTPLRL 600 SRPLVQLPFS TKCKPPRSLL SIGSSSGFFT GHNYGKPNIL RSQPKFEKSL QTAPEDEMPE 660 ILRGNCTPCS GIKTSSPNSK RVSPPHTILG SSPSRRSGRK LILQSIPSFP SLTPKH*
|
Expression --
Description ? help
Back to Top |
Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: Expressed at the late stage of pollen development in tricellular and mature pollen. {ECO:0000269|PubMed:18057042}. |
Uniprot | TISSUE SPECIFICITY: Ubiquitous but expressed mostly in all the aerial organs with highest expression in flowers. {ECO:0000269|PubMed:10769245, ECO:0000269|PubMed:18057042}. |
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Plays a role in development of both male and female reproductive tissues. {ECO:0000250}. |