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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Ciclev10003771m |
| Common Name | CICLE_v10003771mg |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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| Family |
GATA |
| Protein Properties |
Length: 177aa MW: 19944.6 Da PI: 8.4842 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Ciclev10003771m | genome | ICGC | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 58 | 1.3e-18 | 111 | 145 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
Cs+C t +Tp+WR gp g+ktLCnaCG++y++ +l
Ciclev10003771m 111 CSHCETRHTPQWRVGPLGPKTLCNACGVRYKSGRL 145
*******************************9986 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 177 aa
Download sequence Send
to blast |
MAENIFTFDD EGDFSYSDSC SYTSSPLCVP QDPIDEIELY PNFLNDSISI SNLDVSNFSS 60
EFETPMMKKQ AAAAAQGCNG FLGNKKPRGK REGRRGMWSM SMNEELWQRK CSHCETRHTP 120
QWRVGPLGPK TLCNACGVRY KSGRLLPEYR PAASPTFDVH IHSNFHRKIL KKKKGI*
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