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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Ciclev10000805m |
Common Name | CICLE_v10000490mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
BES1 |
Protein Properties |
Length: 539aa MW: 60461.6 Da PI: 5.791 |
Description |
BES1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Ciclev10000805m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF822 | 153.4 | 1.7e-47 | 65 | 205 | 2 | 133 |
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr...kgskpl...eeaeaagssas.a 88
g+g+k+++kE+E++k+RER+RRai+++++aGLR++Gn++lp+raD+n+Vl+AL+reAGw+ve+DGttyr ++++++ ++++aa + ++ a
Ciclev10000805m 65 GKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWTVEPDGTTYRlsnQSQSHHhlhQQMAAAAATTTaA 158
899******************************************************************7773333334464444443333334 PP
DUF822 89 spesslq..sslkssalaspvesysaspksssfpspssldsislasa 133
p s++ +s+k++++++ ve + ++++ ++++sp+s+ds+ + +
Ciclev10000805m 159 FPVRSVEspLSVKNCSVKASVECQPSVLRIDESLSPASFDSVVIPER 205
444444435789*****************************999876 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0000272 | Biological Process | polysaccharide catabolic process |
GO:0048831 | Biological Process | regulation of shoot system development |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0016161 | Molecular Function | beta-amylase activity |
Sequence ? help Back to Top |
Protein Sequence Length: 539 aa
Download sequence Send
to blast |
MNTIENIDEN PNQELLTQPP TQTQNQTQSH SRRPRGFAAT AAAAAAAAAA ANNNSNNNNN 60 NASSGKGKKE REKEKERTKL RERHRRAITS RMLAGLRQYG NFPLPARADM NDVLAALARE 120 AGWTVEPDGT TYRLSNQSQS HHHLHQQMAA AAATTTAAFP VRSVESPLSV KNCSVKASVE 180 CQPSVLRIDE SLSPASFDSV VIPERDSRGG EFNASTSPIN NSVECLEADQ LIQDVRAGEH 240 EDDFTGTPYI PVYVMLANHV INNFCQLVDP ELIRQEISHM KALNVDGVIV NCWWGIVEGW 300 NPQKYAWSGY RELFNIIREF NLKVQVVMAF HEYGANDSGD AWISLPQWVM EIGKGNQDIF 360 FTDREGRRNT ECLSWGVDKE RVLNGRTGIE VYFDFMRSFR TEFDDLFVAG LICAVEIGLG 420 PSGELKYPSL SERMGWRYPG IGEFQCYDRY LQQSLRKAAK LRGHSFWARG PDNAGQYNSL 480 PHETGFFCER GDYDSYYGRF FLNWYAQTLI DHADNVLSLA SLAFEETKII VKVCTELS*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JX139698 | 0.0 | JX139698.1 Citrus trifoliata beta-amylase 7 (BAM7) mRNA, complete cds. |