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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cc11_g17410 |
Common Name | GSCOC_T00038308001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
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Family |
NAC |
Protein Properties |
Length: 279aa MW: 30748.2 Da PI: 9.697 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cc11_g17410 | genome | CGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 155.6 | 2.1e-48 | 14 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98
lppGfrFhPtdeelvv+yLk+k+ + +l++ ++i+evd++k++PwdLp e+e yfFskr+ ky++g+r+nrat sgyWkatg dk++++ +++
Cc11_g17410 14 LPPGFRFHPTDEELVVQYLKRKALSCPLPA-SIIPEVDVCKSDPWDLPGD---LERERYFFSKREVKYRSGNRSNRATGSGYWKATGVDKQIVACRSR 107
79****************************.89***************44...46899***********************************97444 PP
NAM 99 l.....vglkktLvfykgrapkgektdWvmheyrl 128
l g+kktLvfy+g+ p+g +tdWvmheyrl
Cc11_g17410 108 LgvggvGGVKKTLVFYRGKPPNGIRTDWVMHEYRL 142
45555599*************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 279 aa
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to blast |
MEKLNFVKNG VLRLPPGFRF HPTDEELVVQ YLKRKALSCP LPASIIPEVD VCKSDPWDLP 60 GDLERERYFF SKREVKYRSG NRSNRATGSG YWKATGVDKQ IVACRSRLGV GGVGGVKKTL 120 VFYRGKPPNG IRTDWVMHEY RLVNVVEAAA PISPLQNKSA QESWVLCRIF LKRRSGKSSE 180 DEVTESSLPN CTAAAPPPLG GKMNGVVVFY DFLGKDTREL NPGATISSSS GCSGITEISC 240 NEAEDMEESS SCTTASSMLG KKKPRERIHQ PRKFGRSV*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 2e-47 | 12 | 177 | 15 | 170 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-47 | 12 | 177 | 15 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-47 | 12 | 177 | 15 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-47 | 12 | 177 | 15 | 170 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-47 | 12 | 177 | 18 | 173 | NAC domain-containing protein 19 |
3swm_B | 2e-47 | 12 | 177 | 18 | 173 | NAC domain-containing protein 19 |
3swm_C | 2e-47 | 12 | 177 | 18 | 173 | NAC domain-containing protein 19 |
3swm_D | 2e-47 | 12 | 177 | 18 | 173 | NAC domain-containing protein 19 |
3swp_A | 2e-47 | 12 | 177 | 18 | 173 | NAC domain-containing protein 19 |
3swp_B | 2e-47 | 12 | 177 | 18 | 173 | NAC domain-containing protein 19 |
3swp_C | 2e-47 | 12 | 177 | 18 | 173 | NAC domain-containing protein 19 |
3swp_D | 2e-47 | 12 | 177 | 18 | 173 | NAC domain-containing protein 19 |
4dul_A | 2e-47 | 12 | 177 | 15 | 170 | NAC domain-containing protein 19 |
4dul_B | 2e-47 | 12 | 177 | 15 | 170 | NAC domain-containing protein 19 |
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional repressor that negatively regulates the expression of genes involved in xylem vessel formation. Represses the transcriptional activation activity of NAC030/VND7, which regulates protoxylem vessel differentiation by promoting immature xylem vessel-specific genes expression (PubMed:20388856). Transcriptional activator that regulates the COLD-REGULATED (COR15A and COR15B) and RESPONSIVE TO DEHYDRATION (LTI78/RD29A and LTI65/RD29B) genes by binding directly to their promoters. Mediates signaling crosstalk between salt stress response and leaf aging process (PubMed:21673078). May play a role in DNA replication of mungbean yellow mosaic virus (PubMed:24442717). {ECO:0000269|PubMed:20388856, ECO:0000269|PubMed:21673078, ECO:0000269|PubMed:24442717}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By abscisic acid (ABA) and salt stress. {ECO:0000269|PubMed:21673078}. |