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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cc11_g09930 |
Common Name | GSCOC_T00032649001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
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Family |
MYB |
Protein Properties |
Length: 283aa MW: 31997.7 Da PI: 7.7525 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cc11_g09930 | genome | CGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 54 | 3.9e-17 | 26 | 73 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+WT eEd ll+++++ G g+W++ a++ g++Rt+k+c++rw++yl
Cc11_g09930 26 RGPWTLEEDNLLIHYITCNGEGRWNSLAKCAGLKRTGKSCRLRWLNYL 73
89********************************************97 PP
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2 | Myb_DNA-binding | 53.4 | 6e-17 | 79 | 122 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+ T++E++l+++++ ++G++ W++Iar+++ gRt++++k++w++
Cc11_g09930 79 RGNLTPQEQLLILELHSKWGNR-WSKIARHLP-GRTDNEIKNYWRT 122
7999******************.*********.***********96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 283 aa
Download sequence Send
to blast |
MSKGRITTKS TSNPNEEEGS SIDLRRGPWT LEEDNLLIHY ITCNGEGRWN SLAKCAGLKR 60 TGKSCRLRWL NYLKPDIRRG NLTPQEQLLI LELHSKWGNR WSKIARHLPG RTDNEIKNYW 120 RTRVQKQARQ LNVDSNSKKF LEAIKCFWMP RLLEKMEQSS SLSSSSSISS ISTPDNHNSA 180 SPSLATNKTP LASSSPLADS KKCSSDSNNS ACNNSIEGDS CYHIFSHYQP PEMSAEAMES 240 PDMNFSECQI SEADNWFNDD MSAGAFWNTD ELWHFRKPEV GI*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription repressor of phosphate (Pi) starvation-induced genes. Regulates negatively Pi starvation responses via the repression of gibberellic acid (GA) biosynthesis and signaling. Modulates root architecture, phosphatase activity, and Pi uptake and accumulation. {ECO:0000269|PubMed:19529828}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Slightly induced by salicylic acid (PubMed:16463103). Induced reversibly in response to phosphate (Pi) deficiency but repressed in the presence of Pi, specifically in the leaves. Availability of Pi increases with decreased levels (PubMed:19529828). {ECO:0000269|PubMed:16463103, ECO:0000269|PubMed:19529828}. |